Gene Score gda Association Type Type Original DB Sentence supporting the association PMID PMID Year
Entrez Id: 7030
Gene Symbol: TFE3
TFE3
0.360 Biomarker disease BEFREE Somatic translocations of this X-linked gene cause papillary renal cell carcinoma in which nuclear accumulation of the TFE3 oncoprotein is one of the most significant histopathologic characteristics.Early this year, Villegas et al. identified missense mutations in a TFE3 domain required for cytoplasmic inactivation as potentially causal for a mosaic human developmental disorder. 31833172 2020
Entrez Id: 4233
Gene Symbol: MET
MET
0.800 GeneticVariation disease BEFREE Three patients with papillary renal cell carcinoma (PRCC) and MET aberrations had partial responses with durations from 39 to 147 weeks. 30952639 2019
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.370 GeneticVariation disease BEFREE In the Oncomine database, FBXO11 mRNA levels were lower in normal tissues than in cancer tissues, including clear cell renal cell carcinoma (ccRCC), papillary renal cell carcinoma (pRCC), hereditary ccRCC, non-hereditary ccRCC, VHL mutant ccRCC and VHL wild-type ccRCC. 31159774 2019
Entrez Id: 7428
Gene Symbol: VHL
VHL
0.370 PosttranslationalModification disease BEFREE The molecular mechanisms involved in pRCC development and drug resistance are more diverse than in clear-cell RCC, in which inactivation of VHL occurs in the majority of tumours. 31602010 2019
Entrez Id: 3566
Gene Symbol: IL4R
IL4R
0.300 Biomarker disease CTD_human Polymorphism rs4787951 in IL-4R contributes to the increased risk of renal cell carcinoma in a Chinese population. 30472377 2019
Entrez Id: 3815
Gene Symbol: KIT
KIT
0.020 Biomarker disease BEFREE High positive rates for CK7 (94%), CD117 (87%), Claudin-7 (94%), and their combinations (CK7+CD117, 79%; CK7+Claudin-7, 88%; CD117+Claudin-7, 82%; CK7+CD117+Claudin-7, 76%) were observed in CHRCC compared to those in CCRCC, RO, and PRCC, with increasingly higher SP when combinations of the "three 7" markers were applied (CK7, 0.80; CD117, 0.82; Claudin-7, 0.78; CK7+CD117, 0.95; CK7+Claudin-7, 0.97; CD117+Claudin-7, 0.97; CK7+CD117+Claudin-7, 1). 31737127 2019
Entrez Id: 80204
Gene Symbol: FBXO11
FBXO11
0.010 AlteredExpression disease BEFREE In the Oncomine database, FBXO11 mRNA levels were lower in normal tissues than in cancer tissues, including clear cell renal cell carcinoma (ccRCC), papillary renal cell carcinoma (pRCC), hereditary ccRCC, non-hereditary ccRCC, VHL mutant ccRCC and VHL wild-type ccRCC. 31159774 2019
Entrez Id: 6241
Gene Symbol: RRM2
RRM2
0.010 Biomarker disease BEFREE A 3-mRNA signatures consisting of ERG, RRM2, and EGF was constructed to predict survival in pRCC. 31348324 2019
Entrez Id: 1950
Gene Symbol: EGF
EGF
0.010 Biomarker disease BEFREE A 3-mRNA signatures consisting of ERG, RRM2, and EGF was constructed to predict survival in pRCC. 31348324 2019
Entrez Id: 55384
Gene Symbol: MEG3
MEG3
0.010 AlteredExpression disease BEFREE Reverse transcription‑quantitative polymerase chain reaction analysis was conducted to validate the results of the bioinformatics analyses; it was revealed that lncRNA MEG3 expression levels were downregulated in PRCC tumor tissues compared with adjacent non‑tumor tissues. 30957192 2019
Entrez Id: 699
Gene Symbol: BUB1
BUB1
0.010 Biomarker disease BEFREE In general, the 5-mRNA (CCNB2, IGF2BP3, KIF18A, PTTG1, and BUB1) were identified and validated, which can predict papillary renal cell carcinoma patient survival. 30822312 2019
Entrez Id: 207
Gene Symbol: AKT1
AKT1
0.010 GeneticVariation disease BEFREE Drug resistance to multiple therapies in pRCC occurs via genetic alteration (such as mutations resulting in abnormal receptor tyrosine kinase activation or RALBP1 inhibition), dysregulation of signalling pathways (such as GSK3β-EIF4EBP1, PI3K-AKT and the MAPK or interleukin signalling pathways), deregulation of cellular processes (such as resistance to apoptosis or epithelial-to-mesenchymal transition) and interactions between the cell and its environment (for example, through activation of matrix metalloproteinases). 31602010 2019
Entrez Id: 10928
Gene Symbol: RALBP1
RALBP1
0.010 GeneticVariation disease BEFREE Drug resistance to multiple therapies in pRCC occurs via genetic alteration (such as mutations resulting in abnormal receptor tyrosine kinase activation or RALBP1 inhibition), dysregulation of signalling pathways (such as GSK3β-EIF4EBP1, PI3K-AKT and the MAPK or interleukin signalling pathways), deregulation of cellular processes (such as resistance to apoptosis or epithelial-to-mesenchymal transition) and interactions between the cell and its environment (for example, through activation of matrix metalloproteinases). 31602010 2019
Entrez Id: 55323
Gene Symbol: LARP6
LARP6
0.010 Biomarker disease BEFREE Moreover, current research fails to adequately include pRCC laboratory models, such as the ACHN or Caki-2 pRCC cell lines. 31602010 2019
Entrez Id: 1366
Gene Symbol: CLDN7
CLDN7
0.010 Biomarker disease BEFREE High positive rates for CK7 (94%), CD117 (87%), Claudin-7 (94%), and their combinations (CK7+CD117, 79%; CK7+Claudin-7, 88%; CD117+Claudin-7, 82%; CK7+CD117+Claudin-7, 76%) were observed in CHRCC compared to those in CCRCC, RO, and PRCC, with increasingly higher SP when combinations of the "three 7" markers were applied (CK7, 0.80; CD117, 0.82; Claudin-7, 0.78; CK7+CD117, 0.95; CK7+Claudin-7, 0.97; CD117+Claudin-7, 0.97; CK7+CD117+Claudin-7, 1). 31737127 2019
Entrez Id: 58508
Gene Symbol: KMT2C
KMT2C
0.010 GeneticVariation disease BEFREE Whole exome sequencing showed a KMT2C-specific pathogenic mutation among all PAs and PRCCs. 31381885 2019
Entrez Id: 5831
Gene Symbol: PYCR1
PYCR1
0.010 Biomarker disease BEFREE These findings showed that disordered expression of PYCR1 could modulate PRCC progression through the Akt/mTOR pathway, implying a theoretical basis for PYCR1 as a potential therapeutic target in future clinical PRCC treatment. 31428683 2019
Entrez Id: 23081
Gene Symbol: KDM4C
KDM4C
0.010 AlteredExpression disease BEFREE This analysis, applied to primary cancers with and without c-<i>met</i> mutation, showed overexpression of the BHLHE40 and KDM4C only in the c-<i>met</i>-mutated PRCC tumors, as predicted by c-<i>met</i>-mutated embryoid bodies transcriptome. 31575031 2019
Entrez Id: 5754
Gene Symbol: PTK7
PTK7
0.010 Biomarker disease BEFREE Copy number analysis reveals that copy gain of PTK7 mostly occurs in advanced-stage type 2 PRCC. 31361072 2019
Entrez Id: 8321
Gene Symbol: FZD1
FZD1
0.010 AlteredExpression disease BEFREE We screened the FZD1 mRNA in clear cell renal cell carcinoma (ccRCC) and papillary renal cell carcinoma (pRCC) from TCGA database and Oncomine database. 30854133 2019
Entrez Id: 4233
Gene Symbol: MET
MET
0.800 Biomarker disease BEFREE In metastatic pRCC with a MET amplification, crizotinib maybe a potential met-inhibitory therapeutic option. 30466410 2018
Entrez Id: 240
Gene Symbol: ALOX5
ALOX5
0.300 Biomarker disease CTD_human Mitochondrial uncoupling reveals a novel therapeutic opportunity for p53-defective cancers. 30258081 2018
Entrez Id: 8821
Gene Symbol: INPP4B
INPP4B
0.300 Biomarker disease CTD_human SubID, a non-median dichotomization tool for heterogeneous populations, reveals the pan-cancer significance of INPP4B and its regulation by EVI1 in AML. 29415082 2018
Entrez Id: 9370
Gene Symbol: ADIPOQ
ADIPOQ
0.300 Biomarker disease CTD_human Adiponectin gene polymorphisms and obesity increase the susceptibility to arsenic-related renal cell carcinoma. 29723618 2018
Entrez Id: 242
Gene Symbol: ALOX12B
ALOX12B
0.300 Biomarker disease CTD_human Mitochondrial uncoupling reveals a novel therapeutic opportunity for p53-defective cancers. 30258081 2018